Conference proceedings

Computational Breakthroughs In Aquatic Taxonomy: The Role Of Deep Learning And DNA Barcoding

Aquatic Ecosystems
Deep Learning
Taxonomic Identification
Metagenomic Sequences
Environment Modeling
Machine Learning

Aquatic ecosystems are crucial in maintaining environmental equilibrium and sustaining human well-being. However, the traditional manual methods used in hydrobiological research have limitations in providing a far-reaching understanding of these intricate ecosystems. Data science, machine learning, and deep learning techniques offer a variety of opportunities to overcome these limitations and unlock new insights into aquatic environments. This study highlights the impact of computational tools in areas such as taxonomic identification, metagenomic sequence analysis, and water quality prediction. Deep learning techniques have demonstrated superior accuracy in classifying organisms, including those previously unidentified by conventional methods. In metagenomic sequence analysis, machine learning aids in effectively ssembling DNA sequences, aligning them with known databases, and addressing challenges related to sequence repeats, errors, and missing data. Furthermore, predictive models have been developed to provide insights into water quality parameters, such as eutrophication events and heavy metal concentrations. These advancements lead to informed conservation measures and a deep understanding of the intricate relationships within aquatic ecosystems. However, challenges persist, including data quality issues, model interpretability, and the need for robust training datasets. Thus, data integration strategies designed specifically for environmental and genomic studies are necessary. Data fusion and imputation can help address data scarcity and provide a comprehensive view of hydrobiological processes. As the study of aquatic ecosystems continues to evolve, the synergy between computational methods and traditional hydrobiological techniques holds immense potential. By everaging the power of data science and cutting-edge technologies, researchers can gain a deep understanding of aquatic environments, monitor changes in biodiversity, and develop informed strategies for sustainable management amidst global environmental shifts.

Related by author

19 publications found

2023
Conference proceedings

Scrutinised And Compared: HVG Identification Methods In Terms Of Common Metrics

Publisher: ICAIIT

Authors: Nadiia Kasianchuk, Yevhenii Kukuruza, Vladyslav Ostash, Anastasiia Boshtova, Dmytro Tsvyk, Matvii Mykhailichenko

2023
Journal article

Blue On Red: Chemical Conditions Of Liquid Water Emerging On Simulated Martian Regolith

Publisher: Icarus

Authors: Piotr Rzymski, Piotr Klimaszyk, Nadiia Kasianchuk, Paulina Jakubiak, Jędrzej Proch, Przemysław Niedzielski

2019
Journal article

The Effects Of ZnO Nanostructures Of Different Morphology On Bioenergetics And Stress Response Biomarkers Of The Blue Mussels Mytilus Edulis

Publisher: Science of The Total Environment

Authors: Nadiia Kasianchuk, Joydeep Dutta, Sergey Dobretsov, Inna Sokolova, Fei Ye, Fangli Wu, Halina Falfushynska

2024
Journal article

The Resilience Of Ukrainian Scientists

Publisher: Cell Systems

Authors: Oksana Piven, Valerii Pokrytiuk, Nadiia Kasianchuk, Bohdan Ostash, Svitlana Dekina, Rostyslav Panchuk, Oleksiy Boldyriev, Vitalina Bashynska, Andrii Zaremba, Yuliia Faidiuk, Maria Yu Obolenskaya, Anastasiia Polishchuk, Oleksandr Petrenko

2019
Journal article

Pooled Biochemical And mRNA Markers Of The Blue Mussels Mytilus Edulis

Publisher: PANGAEA

Authors: Inna Sokolova, Nadiia Kasianchuk, Halina Falfushynska, Fangli Wu, Fei Ye, Joydeep Dutta, Sergey Dobretsov

2023
Journal article

Gene‑Editing And RNA Interference In Treating Hepatitis B: A Review

Publisher: Viruses

Authors: Nadiia Kasianchuk, Krystyna Dobrowolska , Sofiia Harkava, Andreea Bretcan, Dorota Zarebska-Michaluk, Jerzy Jaroszewicz, Robert Flisiak, Piotr Rzymski

2021
Conference proceedings

Oxidative Damage In Zebrafish Exposed To Environment Realistic Concentrations Of Roundup And Chlorpyrifos

Publisher: International Multidisciplinary Scientific GeoConference

Authors: Halina Falfushynska, Nadiia Kasianchuk, O. Bodnar, O. Horyn, I. Khatib

2023
Journal article

COVID‐19 Vaccinations And Rates Of Infections, Hospitalizations, ICU Admissions, And Deaths In Europe During SARS‐CoV‐2 Omicron Wave In The First Quarter Of 2022

Publisher: Journal of Medical Virology

Authors: Nadiia Kasianchuk, Piotr Rzymski, Dominika Sikora, Barbara Poniedziałek

2023
Journal article

A Review Of Common Cyanotoxins And Their Effects On Fish

Publisher: Toxics

Authors: Nadiia Kasianchuk, Halina Falfushynska, Eduard Siemens, Eliana Henao, Piotr Rzymski

2020
Journal article

Вивчення Ефективності Хлорели Щодо Зменшення Цитотоксичних Проявів У Смугастого Даніо За Впливу Органофосфатних Пестицидів

Publisher: Наукові записки Тернопільського національного педагогічного університету імені Володимира Гнатюка

Authors: Nadiia Kasianchuk, O. Bodnar, S. Senko, I. Osypenko, I. Khatib, Halina Falfushynska